PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS69898.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family MYB_related
Protein Properties Length: 163aa    MW: 18259.9 Da    PI: 4.3954
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS69898.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.53e-081252348
                     -HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                     +W++Ia +++ gRt++++k++w+++l
       EPS69898.1  1 RWAAIACHLP-GRTDNDVKNFWNSHL 25
                     4*********.************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF002492.2E-6125IPR001005SANT/Myb domain
SuperFamilySSF466892.28E-6131IPR009057Homeodomain-like
PROSITE profilePS5129414.596129IPR017930Myb domain
CDDcd001677.92E-6125No hitNo description
Gene3DG3DSA:1.10.10.601.1E-10125IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
RWAAIACHLP GRTDNDVKNF WNSHLMKRVG IEQSSSSPPT SNSVHHQWEP PVSKPSGGGD  60
YFMRLWNSEV GESFRNINDF ESDGVCHSPC SQTSSLTKVE SSWYKPEREM DDGDDEPWSK  120
NDPATCSDAS KSHCEMDDSS AMLKLLLEFP AGENDMGFLQ DDL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076175.12e-42PREDICTED: transcription factor MYB3-like
TrEMBLS8E2M71e-119S8E2M7_9LAMI; Uncharacterized protein (Fragment)
STRINGSolyc05g048830.2.11e-26(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.16e-22myb domain protein 17
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]